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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76611580
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPCAVAAP PAGLSGPGEA GPGAAGERTP RKKEPPRASP PGGLAEPPGS AGPQAGPTAV  60
   61 PGSATPMETG IAETPEGRRT SRRKRAKVEY REMDESLANL SEDEYYSEEE RNAKAEKEKK 120
  121 LPPPPPQAPP EEENESEPEE PSGQAGGLQD DSSGGYGDGQ ASGVEGAAFQ SRLPHDRMTS 180
  181 QEAACFPDII SGPQQTQKVF LFIRNRTLQL WLDNPKIQLT FEATLQQLEA PYNSDTVLVH 240
  241 RVHSYLERHG LINFGIYKRI KPLPTKKTGK VIIIGSGVSG LAAARQLQSF GMDVTLLEAR 300
  301 DRVGGRVATF RKGNYVADLG AMVVTGLGGN PMAVVSKQVN MELAKIKQKC PLYEANGQAD 360
  361 TVKVPKEKDE MVEQEFNRLL EATSYLSHQL DFNVLNNKPV SLGQALEVVI QLQEKHVKDE 420
  421 QIEHWKKIVK TQEELKELLN KMVNLKEKIK ELHQQYKEAS EVKPPRDITA EFLVKSKHRD 480
  481 LTALCKEYDE LAETQGKLEE KLQELEANPP SDVYLSSRDR QILDWHFANL EFANATPLST 540
  541 LSLKHWDQDD DFEFTGSHLT VRNGYSCVPV ALAEGLDIKL NTAVRQVRYT ASGCEVIAVN 600
  601 TRSTSQTFIY KCDAVLCTLP LGVLKQQPPA VQFVPPLPEW KTSAVQRMGF GNLNKVVLCF 660
  661 DRVFWDPSVN LFGHVGSTTA SRGELFLFWN LYKAPILLAL VAGEAAGIME NISDDVIVGR 720
  721 CLAILKGIFG SSAVPQPKET VVSRWRADPW ARGSYSYVAA GSSGNDYDLM AQPITPGPSI 780
  781 PGAPQPIPRL FFAGEHTIRN YPATVHGALL SGLREAGRIA DQFLGAMYTL PRQATPGVPA 840
  841 QQSPSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle