YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76616622
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGARLGLWV CTLSCVVQAY PNSSPLLGSS WGGLTHLYTA TARNSYHLQI HGDGHVDGSP  60
   61 QQTVYSALMI RSEDAGFVVI TGVMSRRYLC MDFTGNIFGS HHFSPESCRF RQRTLENGYD 120
  121 VYHSPQHRFL VSLGRAKRAF LPGTNPPPYA QFLSRRNEIP LPHFAATARP RRHTRSAHDS 180
  181 GDPLSVLKPR ARATPVPAAC SQELPSAEDS GPAASDPLGV LRGHRLDVRA GSAGAERCRP 240
  241 FPGFA

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	245	0.99