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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76618511
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAASAPQ QLSDEELFSQ LRRYGLSPGP VTESTRPVYL KKLKKLREEE QQQHRSGGRG  60
   61 TKTRNSNNNN TAAATVAAAG PAAAAVGMGV RPVSGDLSFL RTPGGLGRVS ASGPETPLGG 120
  121 PGGASATLTA GSKVLLGFSS DESDVEASPR DQAGGGGGRK DRAPLQYRGL KPPSAPLAAS 180
  181 EVTNSNSAER RKPHSWWGAR RPAAPELQSP SGRDGAADDE EQEGEDGEDR DPEAEEPLWS 240
  241 GRTVNGSRLL PYSCRENYSD SEEEEDDDVA SSRQVLKDDT LSRHRPRRGH SKPLSPLPAK 300
  301 SAGGRLETSV QGGGGIAMND RAAAAGSLDR SRNLEESAAA AAEQGGGCDP LDSSPIPRYR 360
  361 VNAKKLTPLL PPPLADMDST LDSSTGSLLK TNNHIGGGAF GVDSPRIFPN SLPPSAAVAA 420
  421 SSSLRINHSN HTGSNHTYLK NTYNKPKLSE PEEELLQQFK REEVSPTGGF SAHYLSMFLL 480
  481 TAACLFFLIL GLTYLGMRGT GVSEDGGLGI KNPFDETFGD MQESKKNLMM NTLYKLHDRL 540
  541 AQLAGDHECG SSSQRTLSVQ EAAAYLKDLG PEYEDTFNIS LKWIFENGKD VGIRCVGYGP 600
  601 EEELTDIVDV QFLQSTRPQM SFWCRFRRAF VTVTHRLLLL CLGVVMVCVV LRYMKYRWTK 660
  661 EEEETRQMYD MVVKIIDVLR SHNEACQENK DLQPYMPIPH VRDSLIQPHD RKKMKKVWDR 720
  721 AVDFLAANES RVRTETRRIG GADFLVWRWI QPSASCDKIL VIPSKVWQGQ AFHLDRRNSP 780
  781 PNSLTPCLKI RNMFDPVMEI GDQWHLAIQE AILEKCSDND GIVHIAVDKN SREGCVYVKC 840
  841 LSPEYAGKAF KALHGSWFDG KLVTVKYLRL DRYHHRFPQA LTCNTPLKPS NKHMNSMSHL 900
  901 RLRTGLANSQ GGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle