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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148745028, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKARSAARG KASAAPAGAL GGRARPNPNP FEVKVNRQKF QVLGRKTRHD VGLPGVSRAR  60
   61 ALQKRTQTLL KEYKERDKSN VFRDKRFGEY NSSISPEEKM MKRFALEQQR QHEKKSIYNL 120
  121 NEDEELTHYG QSLADIEKHN DIVDSDSDTE GRGALSAELT ATHFGGGSGP VPGKAAQQPS 180
  181 GGEEPPKSRR ELIEELIARS KQEKRERQAQ REDALELTEK LDQDWKEIQA LLACKTPKSE 240
  241 SGGGKEKPKP DAYDMMVREL GFEMKAQPSN RMKTEEELAR EEQERLRRLE AERLRRMLGR 300
  301 DEDAHSKRPK HLSADDLNDG FVLDTDDRRL LSYKDGKMNV EEEPSGDSSG GDSGEEEEEK 360
  361 GEGWSEGGPE DSDSPDGHSD LESDADSEDA RSADGLVGRE SDGVEVRAQL QGDQRPSPGE 420
  421 RLPRDDRAAA RAQLPYTFAV PESCEELKSL LSGKSMEDQL LVVERIQKCN HPSLAVGNKA 480
  481 KLEKLFGFLL EYIGDLAVSD PPDLGVIDKL VVPLYDLCQM FPESASDAVK FVLRDAMHEM 540
  541 EGTVETTGRA AFPGLDVLIY LKIAGMLFPT SDFWHPVITP ALLCLSQLLT KCPVRSLQDA 600
  601 VKGLFVCCVF LDYVALSQRF IPELINFLAG ILHMATPNKQ SQGYTLVHPF RALGKNSELL 660
  661 LVSDEEDMAT WQRRSLPLQW AGGLKAQTET EANHTRLSCL ALCLALVRRC VLAYGTLPSF 720
  721 HDIARPLRAL LTEHLATRCC PPTLQELSRS VLTEMENQPR HYRPLVCEKS KPVPLKLFTP 780
  781 RLVKVLEFGR KQGSTREEQE RRRLIHKHKR EFKGAVREIR KDNQFLARMR LSEIMERDAE 840
  841 RKRKVKQLFN SLATQEGEWK ALKRKKFKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle