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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76622425, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPSRGRRS EQRGPRTTAA AAAAMATPQP GRAGGPSTPL SPTRLSRLQE KEELRELNDR  60
   61 LAHYIDRVRA LELENDRLQL KISEREEVTT REVSGIKTLY EAELADARRV LDETARDRAC 120
  121 LQIEMGKLRA ELEEATKSAK KREGELTVAQ GRVRDLESVF HRSEAELAAA LSDKRTLEND 180
  181 VAELRAQLAK AEDGHAVAKK QLEKETLMRV DLENRCQSLQ EELAFRKDVF EEEVRETRRR 240
  241 HERRLVEVDS SRQQEYDFKM AQALEELRAQ HDEQVRLYRL ELEQTYQAKL DNAKLSSDQN 300
  301 DKAASAAREE LKEARMRVES LSYQLSSLQK QASAAEDRIR ELEETVAGER DKFRKMLDAK 360
  361 EREMMEVRDM MQQQLAEYQE LLDVKLALDM EISAYRKLLE GEEERLKLSP SPSSRITISR 420
  421 ATTSSSGSSV STAGRPGRSK RKRLEVQEPP GTGSSGLGSS SSTSSGGSFH LAQQASASGS 480
  481 VSIEEIDLEG RFVQLKNSSD KDQSLGNWRI KRQVLEGEEI SYKFTPKYVL RAGQTVTVWA 540
  541 AGAGVAHSPP STLVWKSQNS WGTGESFRTT LVNADGEEVA MRTVKQSSVV RETENGEEGE 600
  601 DEAAEFGEED LFHQQGDPRT TSRGCRVM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle