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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76628705
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVDLKTSLR PLLSDSPFLF LKQEKQFSGP STTWCCFGGS YRGVTASVAA FLGKGKEPSK  60
   61 RGQDRLRKGN SAIGRAVGSA AAERQERRRE RGCAAGRAER RRPSRSNMAP VGGGGRPGSG 120
  121 PARGRLLLAA LVLLKLVNVS RGDTSGMLVW LTKFLRRSEN MKLYALCTRA GVDGPWQRWT 180
  181 DKDSLLLMKE EAGRLLPLWL HVLIIMVLLV LSGIFSGLNL GLMALDPMEL RIVQNCGTQK 240
  241 ERRYARKIEP IRRKGNYLLC SLLLGNVLVN TSLTILLDNL IGSGLVAVAS STIGIVIFGE 300
  301 IVPQALCSRH GLAVGANTII LTKFFMLITF PLSYPISKLL DFFLGQEIRT VYNREKLMEM 360
  361 LKVTEPYNDL VKEELNMIQG ALELRTKTVE DIMTQLQDCF MIRSDAILDF NTMSEIMESG 420
  421 YTRIPVFEDE QSNIVDILYV KDLAFVDPDD CTPLKTITRF YNHPVHFVFH DTKLDAMLEE 480
  481 FKKGKSHLAI VQKVNNEGEG DPFYEVLGLV TLEDVIEEII KSEILDESDM YTDNRSRKRV 540
  541 SEKNKRDFSA FKDADNELKV KISPQLLLAA HRFLSTEVPQ FSPSLVSEKI LLRLLKYPDV 600
  601 IQELKFDEHN KYYIRHYLYT RNKPADYFIL ILQGKVEVEA GKENMKFETG AFSYYGTMAL 660
  661 SSAPDRSPSH PTALSRSASL SYPDRSETAS TVPLAGSSNQ FGSSILGQYI SDFSVRALMD 720
  721 LQYIKITRQQ YQNGLLASRM ENCPQFPLDG CAICTENSAD KAEAPPVDET TNLLNERNSL 780
  781 LHRTSHESAI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle