YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61829169
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGVLASHN LPHHEPISFG IDQILSCPEP PGSGLGPGRT GQGHGESAAF SGGFHGASSY  60
   61 GPAASLAPVP GSSGVGPGGV IRVPAHRPLP VQPPAGGAPA VPGPSGLGGA GGLAGLTFPW 120
  121 MDSGRRYAKD RLTAALSPFS GTRRIGHPYQ NRTPPKRKKP RTSFSRSQVL ELERRFLRQK 180
  181 YLASAERAAL AKALRMTDAQ VKTWFQNRRT KWRRQTAEER EAERHRAGRL LLHLQQDALP 240
  241 RPLRPPLPPD PLCLHNSSLF ALQNLQPWAE DNKVASVSGL ASVV

Type	Start	End	Confidence
Non-Cytoplasmic	1	99	0.58
Transmembrane Helix	100	121	0.55
Cytoplasmic	122	284	0.58