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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76630331
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLISQSVI NYVEEENIPA LKALLEKCKD VDERNECGQT PLMIAAEQGN LEIVKELIKN  60
   61 GANCNLEDLD NWTALISASK EGHLHVVDEL LKCGASLEHR DMGGWTALMW ACYKGRTEVV 120
  121 ELLLSHGANP SVTGLQYSVY PIIWAAGRGH ADIVQLLLQN GAKVNCSDKY GTTPLVWAAR 180
  181 KGHLECVKHL LAMGADVDQE GANSMTALIV AVKGGYTQSV KEILKRNPNV NLTDKDGNTA 240
  241 LMIASKEGHT EIVQDLLDAG TYVNIPDRSG DTVLIGAVRG GHVEIVRALL QKYADIDIRG 300
  301 QDSKTALYWA VEKGNATMVR DILQCNPDTE ICTKDGETPL IKATKMRNIE VVELLLDKGA 360
  361 KVSAVDKKGD TPLHIAIRGR SRKLAELLLR NPKDGRLLYR PNKAGETPYN IDCSHQKSIL 420
  421 TQIFGARHLS PTETDGDMLG YDLYSSALAD ILSEPTMQPP ICVGLYAQWG SGKSFLLKKL 480
  481 EDEMKTFAGQ QIEPLFQFSW LVVFLTLLLC GGLGLLFAFT VDLNLGIAVS LSFLAVLYIF 540
  541 FIVIYFGGRR EGESWNWAWV LSTRLARHIG YLELLLKLMF VNPPELPEQT TKALPVRFLF 600
  601 TDYNRLSSVG GETSMAEMIA TLSDACEREF GFLATRLFRV FKTEDTQGKK KWKKTCCLPS 660
  661 FVIFLFIFGC IIAAITLLAI FRVDPKHMTV NAVLISIASI VGLAFVLNCR TWWQVLDSLL 720
  721 NSQRKRLHNA ASKLHKLKSE GFMKVLKCEV ELMARMAKTI DSFTQNQTRL VVIIDGLDAC 780
  781 EQDKVLQMLD TVRVLFSKGP FIAIFASDPH IIIKAINQNL NSVLRDSNIN GHDYMRNIVH 840
  841 LPVFLNSRGL SSARKFLVTS TTNGDVPCSD NTGMQEDADR RVSQNSLGEM TKLGSKTALN 900
  901 RRDTYRRRQM QRTITRQMSF DLTKLLVTED WFSDISPQTM RRLLNIVSVT GRLLRANQIS 960
  961 FNWDRLASWI NLTEQWPYRT SWLILYLEET EGIPDQMTLK TIYERISKNI PTTKDVEPLL1020
 1021 EIDGDIRNFE VFLSSRTPVL VARDVKTFLP CTVNLDPKLR EIIADVRAAR DQINIGGLAY1080
 1081 PPLPLHEPPP RPPSGYSQPA SVCSSSTSFN GPFGGGVVSQ QHHSSYYSGM TGPQHPFYNR1140
 1141 GSGPASGTIP LNSMNVDAVC EKLKQIEGLD QSMLPQYCAT IKKANINGRV LAQCNIDELK1200
 1201 KEMNMNFGDW HLFRSTILEM RNAENQVVPE DPRLLSENSS SVPHGEPARR SAHSELPHTE1260
 1261 LSSQAPYTLN FSFEELNTLG LDEGAPRHSN LSWQSQTRRT PSLSSLTSQD SSIEISKLTD1320
 1321 KVQAEYRDAY REYIAQMSQL EGGTGSTTMS GRSSPHSTYY MGQSSSGGSI HSSLEPEKGK1380
 1381 DSEPKQDDTR KSFLMKRGDV IDYSSSGVST NDASPLDPIT EEDEKSDQSG SKLLPGKKSS1440
 1441 ERSSLFQTDL KLKGGGLRYQ KLPSDEDESG TEESDNTPLL KDDKDKKAER ESRESIEVSQ1500
 1501 STVQSPFEPS SRPKSTCQMP SLTKRTPLTQ E

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