YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76634320
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAAAAA AAATRETWRA ASPRRRRSAA RRPKRREAAA AAGTPGAEPE VDGGVVLRRI  60
   61 QEAREDLVIS DFWSSALETI TGCLRKHLEQ LRAPEGSLSE ALGHLHLDAP PVEADATPGS 120
  121 VPEETLVPGT CCFKCVCYGV GKFASCIIAR SQLAFLLLLL ERCQIPRSHC CVYDPLFSRL 180
  181 EIAVLNALGV VVLGDNEEGK RSVCGEPTIF YMPHCGTALY NNLLWRNWSV DALSKVVIIG 240
  241 NSFGGLEERL LTRILHKHYP YVAKILTGLE ELAFPQTPRY MDVFNDTSLH WFPVQKLTQL 300
  301 PTDTWAFREE PDYQDCEDLE IIRKKTEPPC ADLSSL

Type	Start	End	Confidence
Signal Peptide	1	20	0.93
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	336	0.99