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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76648608
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARWGVPGRS LRGRVGAGPI RATGRANART GWPGSRGSER SYGADVGFGG RRGRPPAFQN  60
   61 NARGALATMQ WRALVLGLVL LRLGLHGVLW LVFGLGPSMG FYQRFPLSFG FQRLRGPDGS 120
  121 ASPASGPADR PGGLSGPSWL QPPAPGAAEG KRRRAPRRPG QGVCGPAHWG YVLGGRGRGR 180
  181 DEYEKRYSSA FPPQLRAQMR DLARGMFVFG YDNYMAHAFP QDELNPIHCR GRGPDRGDPS 240
  241 NLNINDVLGN YSLTLVDALD TLAIMGNSSE FQKAVKLVIN TVSFDKDSTV QVFEATIRVL 300
  301 GSLLSAHRII TDSKQPFGDM TIKDYDNELL HMAHDLAVRL LPAFENTKTG IPYPRVNLKT 360
  361 GVPPDSNNET CTAGAGSLLV EFGILSRLLG DSTFEWVARR AVKALWSLRS SDTGLLGNVV 420
  421 NIQTGHWVGK QSGLGAGLDS FYEYLLKSYI LFGEKEDLEM FNAAYQSIQN YLRRGREACN 480
  481 EGEGDPPLYV NVNMFSGQLM NTWIDSLQAF FPGLQVLIGD VEDAICLHAF YYAIWKRYGA 540
  541 LPERYNWQLQ APDVLFYPLR PELVESTYLL YQATKNPFYL HVGMDILQSL EKHTKVKCGY 600
  601 ATLHHVIDKS KEDRMESFFL SETCKYLYLL FDEENPVHKS GTRYMFTTEG HIISVDEHLR 660
  661 ESPWKEFFSE EGGPDQVGKS GHRPKPQELN VINSSSNCNR VPDERRYALP LKSIYMRQID 720
  721 QMVGLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle