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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76655661, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQAHELFQY FRLPELLDFR QYVRTLPTNT LMGFGAFAAL TTFWYATRPR ALKPPCDLAM  60
   61 QSVEVPGSDG ARRSTLLDSD EPLVYFYDDV RTLYEGFQRG LHVSNNGPCL GSRKPDQPYE 120
  121 WLSYKQVEDM AECVGSALLH KGFKAAPDQF IGIFAQNRPE WVIIEQGCFT YSMVIVPLYD 180
  181 TLGTEAITYI INKAELSLVF VDKPEKANLL LEGVENKLIP CLKTIVLMDS YGSDLLERGK 240
  241 KCGVEIISMK AMEDLGRANR QKPKPPVPED LAVICFTSGT TGNPKGAMIT HRNVVSDCSA 300
  301 FVKMTENTFI PTSDDTLISF LPLAHMFERV VECVMLCHGA KIGFFQGDIR LLMDDLKALQ 360
  361 PTIFPVVPRL LNRMFDRIFG QANTTLKRWL LDFASKRKEA ELRSGIIRNN SLWDKLIFHK 420
  421 IQSSLGGKVR LMITGAAPVS ATVLTFLRAA LGCQFYEGYG QTECTAGCCL TVAGDWTAGH 480
  481 VGPPMPCSII KLVDVEEMNY LAAKGEGEVC VKGSNVFQGY LKDPVKTAEA LDKDGWLHTG 540
  541 DIGKWLPNGT LKIIDRKKHI FKLAQGEYIA PEKIENIYQR SEPIAQVFVH GESLQAFLIA 600
  601 IVVPDVETLG TWAQKRGIVG SFEELCRNKD VKKGILEDMV RLGKESGLKP FEQVKGIYLH 660
  661 PELFSIDNGL LTPTMKAKRP ELRNYFRSQI DELYSTIKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle