YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76657688
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREGAKVLQK GGRKGRALRY VAQRALGEGK LRVKEQTRHK MAAIAAVEAR RRRSWTALVL  60
   61 ACLGVCLGIT FAVDRSNFKT CEESSFCKRQ RSIRPGHSPY RALLDSLQLG PDALTVHLIN 120
  121 EVTKVVLVLE LQGLQKNMTR IRIDELEPRR PRYRVPDVLV ADPPTAGLSV SGRDDNSVEL 180
  181 TVAEGPYKII LTARPFRLDL LEDRSLLLSV NARGLLNLEH QRTPRVSQGS KEPAEGDGAQ 240
  241 PEETPGDDNK PDETQGKPEH DEPGAWEETF KTHSDSKPYG PTSVSLDFSL PGMEHVYGIP 300
  301 EHADNLRLKV TEGGEPYRLY NLDVFQYELY NRMALYGSVP VLLAHSPLRD LGIFWLNAAE 360
  361 TWVDISSNTA GKTLFGKMLD YLQGSGETPQ TDVRWMSESG IIDVFLMLGP SVFDVFRQYA 420
  421 SLTGTQALPP LFSLGYHQSR WNYRDEADVL EVDQGFDDHN LPCDVIWLDI EHADGKRYFT 480
  481 WDPSRFPQPR NMLEHLASKR RKLVAIVDPH IKVDSGYRVH EELQNLGLYV KTRDGSDYEG 540
  541 WCWPGAAGYP DFTNPKMRAW WANMFHFDNY EGSAPNLYVW NDMNEPSVFN GPEVTMLKDA 600
  601 QHYGGWEHRD VHNIYGLYVH MATADGLVLR SGGIERPFVL SRAFFAGSQR FGAVWTGDNA 660
  661 AEWDHMKISI PMCLSLGLVG LSFCGADVGG FFKNPEPELL VRWYQMGAYQ PFFRAHAHLD 720
  721 TGRREPWLLP SQYHEIIRDA LGQRYSLLPF WYTLFYQSHR EGIPVMRPLW VHYPKDVTTF 780
  781 SIDDQFLLGD ALLVHPVSDS EARGVQVYLP GQGEVWYDVQ SYQKYHGPQT LYLPVTLSSI 840
  841 PVFQRGGTIV PRWMRVRRSS DCMKDDPITL FVALSLQGTA QGELFLDDGH TFNYQTRHEF 900
  901 LLRRFSFSGN TLVSSSADPK GHFETPIWIE RVVIIGAGKP ATVVLQTKGS PESRLSFQHD 960
  961 PETSVLILRK PGVNVASDWT IHLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle