YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76666247
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METAAEENTE QSRERKVNSR AEMEIGRYHW MYPGSKNHQY RPVPTLGDRA NPLSSPGCFE  60
   61 CCIKCLGGVP YASLVATILC FSGVALFCGC GHVALAGTVA ILEQHFSTNT SDHALLSEVI 120
  121 QLMQYVIYGI ASFFFLYGII LLAEGFYTTS AVKELHGEFK TTACGRCISG MFVFLTYVLG 180
  181 VAWLGVFGFS AVPVFMFYNI WSTCEVIKSP QTNGTAGVEQ ICVDIRQYGI IPWNAFPGRI 240
  241 CGSALENICN TNEFYMSYHL FIVACAGAGA TVIALIHFLM ILSSNWAYLK DASKMQAYQD 300
  301 IKAKEEQELQ DIQSRSKEQL NSYT

Type	Start	End	Confidence
Cytoplasmic	1	73	0.98
Transmembrane Helix	74	96	0.89
Non-Cytoplasmic	97	124	0.88
Transmembrane Helix	125	147	0.89
Cytoplasmic	148	167	0.85
Transmembrane Helix	168	191	0.88
Non-Cytoplasmic	192	259	0.95
Transmembrane Helix	260	281	0.93
Cytoplasmic	282	324	0.94