YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76672700
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCREQIDHKT IRVEVGSCKI IPAAVSTTAV YKKRKKELGR GNAECHFSIW AILAFLGLAL  60
   61 TISLIFNIFH CVEKQRQEKI CTYSDDYFPR EDEYDLEDSP IYGNVDNVAL EPVDENCYEQ 120
  121 MKARPDRSVN KLQDAPPSQS AINQEKVCYA SLDHNNEGKR RKPRKQKSHL SDKDEEGQMH 180
  181 AKDISLSKTT LVDSYPPESE AIEENIHDDP IRLFGLIRAQ KESLHSLDYD LAQ

Type	Start	End	Confidence
Cytoplasmic	1	45	0.73
Transmembrane Helix	46	69	0.88
Non-Cytoplasmic	70	233	0.75