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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71979957
Protein type: Globular with Signal Peptide
Type Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHYKTGHKQ PRFRYSVLAR CVAWANISVQ VLFPLAVTFT PVMAARAQHA VQPRLSMGNT  60
   61 TVTADNNVEK NVASFAANAG TFLSSQPDSD ATRNFITGMA TAKANQEIQE WLGKYGTARV 120
  121 KLNVDKDFSL KDSSLEMLYP IYDTPTNMLF TQGAIHRTDD RTQSNIGFGW RHFSGNDWMA 180
  181 GVNTFIDHDL SRSHTRIGVG AEYWRDYLKL SANGYIRASG WKKSPDIEDY QERPANGWDI 240
  241 RAEGYLPAWP QLGASLMYEQ YYGDEVGLFG KDKRQKDPHA ISAEVTYTPV PLLTLSAGHK 300
  301 QGKSGENDTR FGLEVNYRIG EPLAKQLDTD SIRERRVLAG SRYDLVERNN NIVLEYRKSE 360
  361 VIRIALPERI EGKGGQTLSL GLVVSKATHG LKNVQWEAPS LLAEGGKITG QGSQWQVTLP 420
  421 AYRPGKDNYY AISAVAYDNK GNASKRVQTE VVITGAGMSA DRTALTLDGQ SRIQMLANGN 480
  481 EQRPLVLSLR DAEGQPVTGM KDQIKTELAF KPAGNIVTRS LKATKSQAKP TLGEFTETEA 540
  541 GVYQSVFTTG TQSGEATITV SVDGMSKTVT AELRATMMDV ANSTLSANEP SGDVVADGQQ 600
  601 AYTLTLTAVD SEGNPVTGEA SRLRFVPQDT NGVTVGAISE IKPGVYSATV SSTRAGNVVV 660
  661 RAFSEQYQLG TLQQTLKFVA GPLDAAHSSI PLNPDKPVVG GTVTAIWTAK DAYDNPVTSL 720
  721 TPEAPSLAGA AAVGSTASGW TNNGDGTWTA QITLGSTAGE LEVMPKLNGQ DAAANAAKVT 780
  781 VVADALSSNQ SKVSVAEDHV KAGESTTVTL IAKDAHGNTI SGLSLSASLT GTASEGATVS 840
  841 SWTEKGDCSY VATLTTGGKT GELRVMPLFN GQPAATEAAQ LTVIAGEMSS ANSTLVADNK 900
  901 APTVKMTTEL TFTVKDAYGN PVTGLKPDAP VFSGAASTGS ERPSAGNWTE KGNGVYVATL 960
  961 TLGSAAGQLS VMPRVNGQNA VAQPLVLNVA GDASKAEIRD MTVKVNNQLA NGQSANQITL1020
 1021 TVVDSYGNPL QGQEVTLTLP QGVTSKTGNT VTTNAAGKVD IELMSTVAGE HSITASVNNA1080
 1081 QKTVTVKFKA DFSTGQATLE VDGSTPKVAN DNDAFTLTAT VKDQYGNLLP GAVVVFNLPR1140
 1141 GVKPLADGNI MVNADKEGKA ELKVVSVTAG TYEITASAGN DQPSNAQSVT FVADKTTATI1200
 1201 SSIEVIGNRA VADGKTKQTY KVTVTDANNN LLKDSDVTLT ASSENLVLDP KGTAKTNEQG1260
 1261 QAVFTGSTTI AATYTLTAKV EQANGQVSTK TAESKFVADD KNAVLAASPE RVDSLVADGK1320
 1321 TTATMTVTLM AGVNPVGGSM WVDIEAPEGV TEKDYQFLPS KADHFSGGKI TRTFSTSKPG1380
 1381 VYTFTFNALT YGGYEMTPVK VTINAVAAET ENGEEEMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle