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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77164377, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKTIRYAGI AIIPTLWVGM IAKAETETSL NEENHAFEPM TVIVTRTARS LAELPASVSV  60
   61 LDSEQIMRRQ AQSMDDLLQV LPNVDFTSGP RPIGETLTIR GLSSERILTT IDGARQDSSI 120
  121 GHLGRFFIEP DLLKRVDVLR GPASAIYGSG ALGGVVTMTT REASDFLAPG QRFGARLKGG 180
  181 YQSVNNESST SAALFGRASD WDFLGNFSYR DSDDITLASG QELDSSAAEN FSGLARVSYK 240
  241 PGAHRLRIGG DYFSTEGIFP ANPQTVSDGA NENAATKIER RTYTFQYSYD DPAHPWFKPK 300
  301 FNAYRNELRD SRNRLESGRQ TTSEFVTTGF NLQNSMDFGD PQDFLMQTIT LGVNYFKDEE 360
  361 EGREDGNPRP SFPKANSDVW GFYIQDEISL GQYLSLIPAV RYDRYTLEIE ERAGGSTTDE 420
  421 AISPRIGGMI HLASWLNLWG SYGKAFRAPT LPERFTEGLH FRGVPGRLPD NFFIPNPDLK 480
  481 PETVYTWEAG FKSAWEELLT ATDRLNLEFT YFDTKADNFI DLKVNTLGGT TQNANLDKAR 540
  541 LHGFETGVRY DSEYFFAGAS FGRTYGENIN TGLPLTNVQP AKGVVNLGGR FSPWGLVFGG 600
  601 RGRFVAKQDR VPPGVLEAAG YSVYDLYATW LPSSAGVKGL RMDFGIDNLT NKAYRRYLSV 660
  661 IEEAGRNFKV ALTYQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle