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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPGH_PSEPF
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSQVQPET LSEYLAHLPM TDEQRAELAG CQSFSELHER LSSKTFDAPT EAAQASVGKR  60
   61 LILSTAEELQ DAEMLVLDAS GRVSMKATPP IRRTKVVPEP WRTNILVRGW RRLTGRTNPP 120
  121 QPPKDANVLP AARWRTVGSI RRYILLVLML GQTIVAGWYM KGIMPYQGWS FVDLEEVLHQ 180
  181 PLLQTATQVL PYALQTSILI MFGILFCWVS AGFWTALMGF LELLTGHDKY RISGKSAGNE 240
  241 PIPKDARTAL VMPICNEDVP RVFAGLRATF ESVAATGDLD RFDFFVLSDS NDTDICVAEQ 300
  301 QAWLDVCREA KGFGKIFYRR RRRRVKRKSG NLDDFCRRWG GDYKYMVVLD ADSVMSGECL 360
  361 TSLVRLMEAT PDAGIIQTAP RASGMDTLYA RMQQFATRVY GPLFTAGLHF WQLGESHYWG 420
  421 HNAIIRMKPF IDHCALAPLP GKGAFSGAIL SHDFVEAALM RRAGWGVWIA YDLPGSYEEL 480
  481 PPNLLDELKR DRRWCHGNLM NFRLFLVKGM HPVHRAVFLT GVMSYLSAPL WFFFLVLSTA 540
  541 LLAVNTLMEP QYFLEPRQLY PLWPQWHPDK AIALFSTTIV LLFLPKLLSI ILIWAKGAKE 600
  601 FGGKFKVTLS MLLEMLFSML LAPVRMIFHT RFVLAAFLGW AATWNSPQRD DDSTPWSEAV 660
  661 KRHGPQTLLG FFWALLVIWL NPSFLWWLVP IVGSLMLSIP VSVISSRVGL GLKSRDESLF 720
  721 LIPEEYNPPQ ALLATDQYTH ENRWHALNDG FVRAVVDPQQ NALACSLATS RHGQAEPIEW 780
  781 LRQERVRHAI KVGPAGLNNH DRLQLLSDPV ALARLHEQVW AEGHAEWLDA WRASVKADPH 840
  841 APLLPLKPVS LQAQPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle