YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043672, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMKIGIVGL GLIGGSLARA FSYLGYQVYG IDTNSQYVEL AYREKVIVNN HSDLNLLTSC  60
   61 DVVFLATPPE TTLQLIPALN FLKPETIITD TVSIKGEIMQ TAREKLNNAK NFIGGHPLTG 120
  121 MERGGYQAGH RFLFENSYYF LIPGPDAPED TVTKLKGLLE KIGALVIVSD VTTHDRITAQ 180
  181 LSHLPHAIAY SLCRMCQKEE DNELLLKLAA GGFRDLTRIA ASSPELWSEI LLYNREEVAK 240
  241 SIDLFIGELL TLKNLLMAGN KNEISAFLKE GQEFRTNLNQ NGKGYLLPLY DLTANIPDRP 300
  301 GMLAKVTGLL ARFNINIKDI EILKAREGDG GVLKLSFATF EERQKAFSLL EKEGYRPVLR 360
  361

Type	Start	End	Confidence
Signal Peptide	1	20	0.91
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	360	0.99