YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044398, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVLVLGAG TMGSGIAQVF AQAGFKVFLR DIEINLVEKG LTTINKNLER LVNKGKLTLE  60
   61 DKQEIIGRIK GIVNIEEAQN VDLVVEGIVE NIEVKKKVFA ELDEIFPANT IFATNTSSLS 120
  121 ITDLAAVTKR PEKVIGMHFF NPVPVMQLVE VIKGVATSEE TYQTICDLVR QLGKTPVTVN 180
  181 EAPGFVVNRL LIPMINEAAY LLMEGVATAE DIDTAMRLGA NHPMGPLALA DLIGLDVCLA 240
  241 IMETLHKEFG DDKYRPCPLL RKMVRAGHLG RKTQRGFYQY TNEN

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	284	0.99