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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78165820, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYGFVIDAR KCIGCHACSV ACKSENQVPL GVNRTWVKYV EKGTFPDTRR YFTVLRCNHC  60
   61 EEPPCVDICP VEALHKRPDG IVDFDSRRCI GCKACAQACP YNSVYIDPET QTTAKCSYCS 120
  121 HRVEIGLKPA CTVICPQQAI ISGDLDDPQS EISKLVANER TVVRKPEKGT GPNVFYINGD 180
  181 GASLDPFQAP EEDAYMWSAQ SRGVGHFAKH AVHGEGHGVP DRSAVGSHGA KPKAGAPRRV 240
  241 YDAPSKGSVW GWEVPAYVWS KAVSAGAFLL LFAFALMPDA ALSPAMQWGL WAISLVFLAL 300
  301 TGAFLVKDLD RPDRFTSVML RPQFGSWLVR GGLTITGYGA FLALWGAGTW LALPMLASAG 360
  361 LWGGAAMALL TAVYTAFLFG SAKGRDFWQS PMLSLHMLLN SVIAGGAAMA LLSLFTGIDE 420
  421 GAAGQLRMVL TGAFVLHLLV MATELYGRHP SVGAERAAEA IRSGSLKNDF WFGSVLLGNL 480
  481 LPLLAVLVPT GSLTLAVASI FALAGVFYTE KVWVKAPQTI SLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle