YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78212783, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKPLVISP SILSADFARL GEEVKAVDEA GADWIHVDVM DGRFVPNITI GPLIVEALRP  60
   61 VTQKPLDVHL MIVEPEKYVP DFAKAGADII SVQVEACPHL HRNLAQIKDL GKKAGAVLNP 120
  121 STPLDTLEYC LELCDLVLIM SVNPGFGGQS FIENQVQKIR DLRRMCDEKG LDPWIEVDGG 180
  181 IKAGNAWKVI EAGANAIVSG SGVFNQPDYA EAIKGIRNSS SKEAVLA

Type	Start	End	Confidence
Signal Peptide	1	18	0.63
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	227	0.99