YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78484406, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIKKILPHP ILSLFLWGIW LLLNNNFSAG HIVLGFILAL IIPMFTSSFW PEKVCLKHPI  60
   61 TLLKFLGIVL WDILVANVTV AKLILGKTAH LQPGFLTIEL DITHPLGISF LANTISLTPG 120
  121 TVSCDLSEDR KQLLVHALHI ENAAETIEEI KQRYERPLME VFPSC

Type	Start	End	Confidence
Cytoplasmic	1	5	0.89
Transmembrane Helix	6	23	0.81
Non-Cytoplasmic	24	28	0.71
Transmembrane Helix	29	50	0.88
Cytoplasmic	51	61	0.78
Transmembrane Helix	62	85	0.80
Non-Cytoplasmic	86	101	0.78
Transmembrane Helix	102	122	0.47
Cytoplasmic	123	165	0.63