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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63095205
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYFNSYTGGI PAVLGNMTEL VRLDAANCGL SGEIPPELGN LAKLDTLFLQ VNGLTGGIPP  60
   61 ELGRLGGLSS LDLSNNALSG EIPASFAALK NLTLLNLFRN KLRGDIPEFV GDLPGLEALQ 120
  121 LWEDNFTGGI PRRLGSNGRF QLLDLSSNRL TGTLPPELCT GGKLETLIAL GNFLFGSIPD 180
  181 SLGKCQSLTR VRLGENYLHG SIPKGLFELP NLTQVELQDN LLSGGFPAVE GTGAPNLGEI 240
  241 SLSNNQLTGA LPASIGSFSG VQKLLLDQNA FTGAIPPEIG RLQQLSKADL SGNAFDGGVP 300
  301 PEIGKCQLLT YLDLSRNNLS GEIPPAIPGM RILNYLNLSR NKLDGEIPAT IAAMQSLTAV 360
  361 DFSYNNLSGL VPATGQFSYF NATSFVGNPG LCGPYLGPCR PGGAGRDHGG HTRGGLSNGL 420
  421 KLLIVLGFLA FSIAFAAMAI LKARSLKKAS EARAWKLTAF QRLEFTCDDV LDSLKEENII 480
  481 GKGGAGIVYK GMMPDGEHVA VKKLLAMSRG SSHDHGFSAE IQTLGRIRHR YIVRLLGFCS 540
  541 NNETNLLVYE YMPNGSLGEL LHGKKGGHLH WDTRYKIAVE AAKGLCYLHH DSSLPIMHRD 600
  601 VKSNNILLDS DFEAHVADFG LAKFLQDSGT SECMSAIAGS YGYIAPEYAY TLKVDEKSDV 660
  661 YSFGVVLLEL ITGKKPVWEF GDGVDIVHWV KMMTDLNKEQ VIKILDPRLS TVPVHEVMHV 720
  721 FYVALLCVEE QSVQRPTMRE VVQILSELPS PTSKQGEEFP SGGDGAASDP PAAAESVEAV 780
  781 TNEAKEHQQQ PSSQSSPPPD LISI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle