YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72388793
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAIILISFL VTLFFNNGVD GHTCTKELYN MNFKDLSITS MVLEHSTTRK ILGNWVHFFF  60
   61 SHFSNPTDAI KYVEDINLYA LDNKDQTCFV RAFTIYLIQN YAKDIKSMSN TDNYETYFKN 120
  121 LLKDVHPDFS KDFLSLFTSA TLLGYIDGLV LKEQDISNLK NDVNIFKKHI SKADRRTHAT 180
  181 YNTNPIPAFA PSDIRTFRRS YLPKEDPSIS VSEVYAARDI NFLAFLGVSD MYYNSDITQP 240
  241 ARGTSIIISK RKRLGLKRRS SSLLLLGPHN HNPTFGFCVK DGKEDYFGSV DDLLPSFFSV 300
  301 MKTKMIYGHK RFLREFDYSL MHKTYKMPNL KGLRLLKSFF RRKNLENFVD MYSNLMSTEL 360
  361 DFLTEDFAEL FDITMNCHMR EHFDRAIVNF HMIKEKGMES

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	400	0.99