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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76873989, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLFKLSFS LACAYFITGY FSNLLLAIDG FAVASWPPAG IAVASFLLWG RKSFLGIFVG  60
   61 ALLTSLIHLD NVVDILNWQV FFQAAAIAIA VVFQAWLGAQ IIIKVIKAPL DLSSLKHSVQ 120
  121 SLIIAGPVCC IIGASVGTSL LVFNNIIAQH AALDSFIAWW IGDSIGVLIF TPLMLAAFNY 180
  181 SVMRYRLQVI LPSLLIYILI SVSFYGAASV KKEKNIQKQE IKTLAVQDSI THKLDEISAH 240
  241 LALLATFFSS SEDVNFKEFR QFTAKQLSYS EEILAFEWVP YVPKSALLEY QQMTQLADVE 300
  301 HFFVKEKSPT NQWQAVAERD VYYPIRYAYP LKGNEDAIGF DLASNDFMQE ALNKSKTLNE 360
  361 MVISQPVKLV QNQAELGVLF LHPVFGSMET EDDFKGFAVA VVSLKKLSQS LLFDHENLVT 420
  421 ASFLDINNTN NTHAIYIANN ESMDLLKSYQ LLIGNRMWQV ELHEPLVTTS WLIYWLAQIV 480
  481 GMLFVWLLVA FLISVTGTNV QIREQVARQT RTLRQEKQKA DEASQIKSQF LANMSHEVRT 540
  541 PINGIKGLHY LALQQNDWQQ ARTYIEQADG ALGVLLRVLN DLLDFSKMEA GKLDLMQEPV 600
  601 DIGRLAEEVI NLIQFEVSVK SLEIKLDYDK NTNLMINTDA IRLKQVLLNL LNNAVKFTAQ 660
  661 GSITLKIWQS KTMTYLSVSD TGIGISKEAQ KKLFRPFAQA DNSTSRQYGG TGLGLSICKK 720
  721 LVELMGGAID LKSTAGQGST FTFSLPLNSP LPKVEKSEQS FSDVDIENVS FANSAVLLVE 780
  781 DNPLNQHVAT AILKTKGCVA DIANDGFAAI EMLTEKSYDI VLMDIQMPKM DGLQATKVIR 840
  841 NELGLLDLPI IGLSANAHDD DVKKALACGM NSYITKPIDA NILFKALWHY LAAIEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle