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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57224531, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNRNTPQL RMPMGGRPMG GGMHMGGGPM GGMRMAQSGE KARNFKDTMA SLLKYLTPYR  60
   61 FPLIIALVLA IFGTVFTIIG PKLLGNATTK LFEGLVSKVT NAAGADIDFT YIGNIVLILV 120
  121 GLYVISAICS YIMGYIMTGV SIKVTYDLRK QIAEKINRLP MKFFDNKTYG EVLSHVTNDV 180
  181 DLISNTLTQS MSQMVTSIVT ILGVLVMMFT INWIMALASL IIVPISIGLI SMIVGRSQKY 240
  241 FRKQQDYLGH INGHVEEMYS AHNVMKAFNG EAKSIAKFKG LNEELYSASW KAQFLSSIMM 300
  301 PMMNFIGNLS YVVVCILGGF LAIQKTIQVG DILAFVQYVR SFTQPLAQTA NIVNVLQSTA 360
  361 AAAERIFEFL GEDEEVPEPS NPVSLKDISG AVSFKDVSFG YSPAKTIIKD FNADIKPGQR 420
  421 VAIVGPTGAG KTTMVKLLMR FYDVNSGAIL VDGVNIQDIK RQEYRSAFGM VLQDTWLFNG 480
  481 SIMDNIRFGK LDATDEEVYT AAKTAYVDHF IHTLPSGYEM IMNEESSNIS QGQKQLLTIA 540
  541 RAVLANPKIL ILDEATSSVD TRTEMLIQQA MENLMKGRTA FIIAHRLSTI HNADIILVMK 600
  601 DGAIVEQGSH ETLLEANGFY ASLYNSQFEA GPAEADS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle