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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPGH_PSEU2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSLPVPMS LNEYLAHLPM SDEQRAELAG CTTFAELHER LSAQPVTDPA EAAQASVGRR  60
   61 LTLTTADQLE DAEMLGVDAS GRLCLKATPP IRRTKVVPEP WRTNILVRGW RRLTGKGNPP 120
  121 KPEHDDLPRD LPKARWRTVG SIRRYILLIL MLGQTIVAGW YMKGILPYQG WSLVSLDEIT 180
  181 RQTFVQTALQ VMPYALQTSI LLLFGILFCW VSAGFWTALM GFLELLTGRD KYRISGASAG 240
  241 NEPIEKGART ALVMPICNED VPRVFAGLRA TFESVAATGD LDRFDFFVLS DTNETDIAVA 300
  301 EQQAWLDVCR ETKGFGKIFY RRRRRRVKRK SGNLDDFCRR WGGDYRYMVV LDADSVMSGE 360
  361 CLTSLVRLME ATPDAGIIQT APRASGMDTL YARMQQFATR VYGPLFTAGL HFWQLGESHY 420
  421 WGHNAIIRMK PFIEHCALAP LPGKGAFAGA ILSHDFVEAA LMRRAGWGVW IAYDLPGSYE 480
  481 ELPPNLLDEL KRDRRWCHGN LMNFRLFLVK GMHPVHRAVF LTGVMSYLSA PLWFFFLVLS 540
  541 TALLAVNTLM EPTYFLEPRQ LYPLWPQWHP EKAVALFSTT IVLLFLPKLL SVILIWAKGA 600
  601 KGFGGKFKVT VSMLLEMLFS VLLAPVRMLF HTRFVLAAFL GWAATWNSPQ RDDDSTPWIE 660
  661 AVKRHGPQTL LGACWALLVF WLNPSFLWWL APIVVSLMLS IPVSVISSRT NLGVKARDEK 720
  721 FFLIPEEFEP PQELISTDRY TYENRWHALK QGFIRAVVDP RQNALACALA TSRHRQAQPI 780
  781 EVVRMERVDQ ALKVGPAKLG NQERLMLLSD PVALGRLHER VWSEGHEEWL AAWRASIEAD 840
  841 PHAPLLPLQP EGKASEPVPV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle