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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63258970, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRNSLRNWF KSGAPGVWMS AGAVSIAVIM TIGLLAVIAV RGLGHFWPAD LVSAQYAVPN  60
   61 QESSVLVGER VEQEQVPRAR LKSAGLPVPD QGPEFMTREL YKVGNRDINP SDFNWVVGEW 120
  121 LTGQSRPADL MTLERREWGN FYGYLVNVKE GGRIVAEGEA AWPVLQERIK RVEKLADELY 180
  181 TLEKKDIGAI NHSIERLRLQ ARKLELDGRL DAAAQADMAA ERAELDARYK VIEARLDGLH 240
  241 QAFDRDSLTA RDGSGKEIEL SLGKVVRAYQ PNAMGTVTKL SFYFEKLWEF LSADPREANT 300
  301 EGGIFPAIFG TVMMTLIMAV IVTPFGVLAA VYLREYARQG PVTRLIRIAV NNLAGVPAIV 360
  361 YGVFGLGFFV YVLGGSVDRL FFPEALPAPT FGTPGLLWAS LTLALLAVPV VIVATEEGLA 420
  421 RIPLTLREGS LALGATKAET LWKIVLPMAS PAMMTGLILA VARAAGEVAP LMLVGVVKLA 480
  481 PSLPLDGNYP YLHLDQKIMH LGFHIYDVGF QSPNVEAARP LVYATALLLV LVIALLNLSA 540
  541 VSIRNHLREK YKALDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle