YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56519717
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMGKLTTFL SLCFVFFYLY QCLKLNNIRK RGILSLIEKE ENKKLAFVNN CSLSNLKVKR  60
   61 NVNKHFYKSK KEKEILESGY LYPFDHLEKK KKKFPPDPYV PSNEENEENE DRIFDELNES 120
  121 AAENELLDYD NDDEDAKKSF GKATFNRPHY RAPVKKRDKD SDEMNKDLDG DLASEPNTTD 180
  181 QITNAMIEND EEISTNEIQK EVINIYVYSS ETNKEQNEIM KDKLYYLMHT AMDSIFIKHF 240
  241 ELNIQSHIDN KEKKISVSYE IKNNTFKKNI HSLTELIEFS HKLKKILNDK VEELFKKKED 300
  301 EEEMEGNEQE QEEDAKYLKN MLKKELEEYK KERKITNISK RNLQVSIESS LKLIEKCTQK 360
  361 MYTQNYEITL RDLKLAYNML PCKYYGYFLS DVCANISMLS YYTNDLQGAF NFALKSIKYE 420
  421 PKYKLSWKCL GDAYRSFRKF WQAKNFYDIA IYLGYKDEKG ENFETITKEL TNLTQSALKN 480
  481 VDLLK

Type	Start	End	Confidence
Signal Peptide	1	22	0.80
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	485	0.98