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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56525338
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRKKLNAE AHPKYREHYI SYKELKNVIK LITGNDTSTY TIKEITTNFG NIRALSGAEY  60
   61 KSPESRFQDI LNAELDKINN FTVAIIKQWF KEAKTYYKEL KRNEKSIDIL NIEKKLNRLG 120
  121 NTLIFIEKYR HINFIGFRKI TKKFDKHNGK TVSSSFYINV VIKSLFMTFD INLLVYILSI 180
  181 CYKYYRIVKN KNNIIEVNEN AKEDQAVLNT NVQHNANVSN CDKINNSMIV ENDNLIKKDI 240
  241 STTEDLPKQT EGLGKQAEDL RKQTEKGVEN TKYIVKLQNV MSVKVEICKH FIFQYNDLKE 300
  301 SDMLTSFNNL MDIISKNKIQ NYYITIYFDD PMLNTYHNYI NQNLQNNECF RIRSYIYSKG 360
  361 DDEQNIKKNT HIQKFNLYEP SHDNNEEFIP PEKLVNQNLE IKTVDDLYSA SIHDMRNNDK 420
  421 SIINDSGFQK KNSDNITSKT DESKLASTNN SVNNIKKQDD GITQKFIEKY ISEIKEKKLK 480
  481 SYIKSKLNRL HFYGENVTGY IDENICYWAH NDKKSIYNND YSEDEEEDNC VEGDVKSDVN 540
  541 KNIDTTNNLD EKKHIWTGKG NKRYSYFDHA IIDISIKEHM DKNIILQLNN LKGVKEIWGY 600
  601 SSFLQGISLF YSNQISTYPH WTVYTHTNLT KPKSIDNSKK NKKEKKKMED CSENSASNGS 660
  661 NVVLSGNTNN YTNGSTQKKK KKKQKKKSEF NGEYKKGITY TGASARIAHQ SEVIFRNEIE 720
  721 KTKSFNNTYH KNPNFYEPLL DSEDDARCQN FKSPSGSIFS FFKRLFFKKS QIGDNKIPKN 780
  781 SVVRVEPKTF FANERTLLQW LNTSVLLSTI SITLLNFSNF YGFISGIIMA PVAIFFIIYS 840
  841 FYIYLKRANA LINKEPIDYT DKVGPGVLVI TLTFALSTVV VLNVYSHFIG VPYKGEAPVN 900
  901 QK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle