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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56526168
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVIIWLFPL LILSIVIKCD NKIKDNIFQN LRKKTKFLVI NEPIVDLDFS ENLFHSLLFD  60
   61 LEVYNNNIYA LDENLLNLQN LNHSSIFKLL TNTYEQVSKE NEKNDEENKI KYIIIASSHT 120
  121 RVHPINLEYL LLKFDKYIYN GNIYQNGDID IKGILNEYNN EIKESLEKKK KFKNISNIID 180
  181 EKYKDDIVSA LLNKDIGSSD KFIKKGDNSN DSNSNYNNQY KGMFVGYGFN DDEPSILHSL 240
  241 NENKNFLFPS MNSGIILDII LLKNIYENYI NIQKQNEKII HKDYIYEISK FIYDNIHVEL 300
  301 VHFENTCLDA KQNVYLTNKE NTEFDVYKYY ITKNLFEDYG SLSIKEVEEK NYENIVMSYF 360
  361 QLAYPITTCA TYSGRSQETF IGFDKFNMIS IENDEKLKYY IKETEEISFN DIEEYKRKFN 420
  421 DINKRYDEIL DNGENNLTHK DIVLGIKSSI NTEDRISYIK KTFDNKKNNK HIFSNFKITP 480
  481 VLKNQKETSI INTELLKGGF DSEDIDIQIF YMSDKESKLF NTVKYDIDDV SKNSSCEKMK 540
  541 QTIFHFYEEY VENDKNKNNN KNMKKQKYLF IGNDDTYVNI KNLVDVMNVS SNKCVHIKKH 600
  601 MYDKYLKSFR FLKKNEPKFF KNFNEKPPLF YQYLKQNLID TIRNLKKYNY IPKYCKDNNG 660
  661 IGNTPKSDVP ILLGKRQSYN TFYNDNESYD YLASEAGILI NDSFAKKIYF CKNCVCPDNE 720
  721 QSDGMMLGEW ANKLNLLTIN FEGFFQSHPA NYNKKYLNTL VPITYNNLNF NKTVDEIKKT 780
  781 YFQHLVNYNK DEIDEKTDSY VDYLDQNFKN TFDNIFHYFF YLKRYYNSPN DEKNNDISKI 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle