YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|65317586
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIGRYIPGN SLIHQLDPRT KLLIVFLYVF VVFLANNAIS YGFLFLYALI ALFFAKVPIR  60
   61 YVLSGLKPIL WIFLFTFFLH IFTNKEGEVL FQLGWFSIHE KGLEQGIYIS IRFFVIILMT 120
  121 TLLTLTTTPI EITDGLETLL KPLKRIKVPV HEIALMMSIS LRFIPTLMDE TSKIMKAQSS 180
  181 RGIDFAGGPI KDRMKAIISL LVPLFISAFK RAEDLAIAME ARGYQSGEGR TKFRQLRWKT 240
  241 SDTVTIISLL CLACILAWVR S

Type	Start	End	Confidence
Cytoplasmic	1	20	0.71
Transmembrane Helix	21	39	0.81
Non-Cytoplasmic	40	40	0.20
Transmembrane Helix	41	59	0.61
Cytoplasmic	60	62	0.35
Transmembrane Helix	63	84	0.82
Non-Cytoplasmic	85	104	0.48
Transmembrane Helix	105	128	0.79
Cytoplasmic	129	239	0.68
Transmembrane Helix	240	259	0.92
Non-Cytoplasmic	260	261	0.79