YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|65321087
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKEGVKMKN KINLQMQNIS FVLIIALALW LKTYLITRFS FDLKIESSTQ ELILFISPLA  60
   61 ASLAFVGLAL FATGEKRNYI ALCINFLLTI ILVGNVMFYD FYSDFVTLPV LGQTSNFGQL 120
  121 GGSIIEILNY KIILAFVDII FFFILLKKKA LVFQTGRVTH PARFVYFLLT VGVFFANLHL 180
  181 AEKERPELLT RSFDRVMLVK NLGLYTHQVY DLTLQVKAGS QKALADSSKL QETENYVKAN 240
  241 QSEPNPNMFG AAKGKNVIVV TLESLQTFLI GAKVNGEEVT PFLNEFINES YYFDNFFHQT 300
  301 GQGKTSDSEF LIDTSLYPLN RGAVFFTHGN NDYTATPEIL RQQGYFTSVF HANNATFWNR 360
  361 NIMYSALGYD RYYNELDYKI TPETNLNWGL KDIEYFDQSV DILKTVDQPF YARFLTLTNH 420
  421 YPFTYDEDTK FIEPYDSGNG VFDRYIVTAR YLDESIKKFI ERLKAEGMYD DSIIVLYGDH 480
  481 YGISEKHNRA MAQFLEKDQI TEFDTLNLQR TPLYIHMPGQ TEGETISKPT GQIDIKPTIL 540
  541 NLLGIDTTND IRFGHDMFSN EYTGFVVLRD GSFITDKYAY KNNIFYDRIT GEIVDLPKNE 600
  601 AQALIKRAQN ELRMSDKIIE GDLLRFSESN KIKTGEVQTK IKETEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle