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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70985921, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSAPRIDFV SLKKSMAAFQ LLQNLQLFEA KICSRLNLFL VHLSHALPPS LISGSSPHSS  60
   61 ILSTSSLPFL NPLIHCIPQF VTSLRHNYIR SSSPAPQLPS QHSHQLCCNG NRHLECICLP 120
  121 MSETHHDNES YELLTNPESL EPTAIENRNR HDRSLSQPAN AEARESHHLG LPGELSRPHR 180
  181 VRFRSISQHR DVDNTDTTEK VYSNSSDSST RTLLNSAPRA TDVTDMLKAE QFDDETDISS 240
  241 RYDGSGYTSA NYPPSTPERI SEDSTTRERT PNRSKSVKQR WREAGQLIRQ KTVRLGERLG 300
  301 RPLDDGEALG ASLLPEDLEG GMPIRRVHSQ YRMPAGDDTD DEDRPNPSAE AHRLVRRMTQ 360
  361 HTNLRHRKPK PAYQRSGQST PERPSSWYDS YRPLSFSGGG GILSQLLKLQ AAQNEKDGLS 420
  421 ATDDSDNGSP MSSGATTPKS GSATPKSGAA TPKKEKVKWY KKPHHRSTAS LVEASMNLSR 480
  481 ATLPSSADVL SMTQQKRGKK KAYRKHRLED EIKVTVHIAE ILARHRYIMQ LCRALMRYGA 540
  541 PTHRLEEYMT MTARVLEVEG QFLYLPGCMI MSFDDPVTRT AEVKLVRSTQ GVDLGRLAET 600
  601 HNVYKNVVHD LIGVEEAIQE LDEIMKRKPR FNKWILVPVY GLAGAAVGPF AFDARPIDMP 660
  661 IIFILGSLVG LMQHVISPRS TLYSNVFEVT AAVLTSFLAR AFGSIRITVD GQKQFLFCFS 720
  721 ALAQSSIALI LPGFMVLCSS LELQSHQMIA GSIRMVFAII YSLFLGYGIT VGTTVYGLID 780
  781 GNATSETTCR DLSIYGSKYI QHFIFVPIFV ICLAVINQAK WKQVPVMIFI ATCGYITNYF 840
  841 STTKLGSRSE VANTVGAFTL GTLGNLYSRL WHGHAATAIL PGIFVLVPSG LASSGSLIAG 900
  901 INYANQVREN LHKSGNGTDT SSQDTSIASL GFGMIQVAIG ITVGLFIAAL VVYPFGKRRN 960
  961 RPESAPANDS TPRTTKNSPQ HQVISSRSKA HSSRDPNSED ADANRNGNEG MAAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle