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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70992541, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSSILAGA ILLASRTSAV DVDPIVIKGS KFFYKSNDTQ FYIRGVAYQQ DYSGSQSSSN  60
   61 SFKDPLADAD ACKRDVPYLE KLGTNTIRVY AVDPTADHTM CMDLLSQAGI YVIADLSSPG 120
  121 ESIIRNDPKW DSDLFNRYVT VVDALAKYTN VIGFFAGNEV SNTKQTTHAS AFVKAAVRDM 180
  181 KAYIKAKNYR PMGVGYATND DSSIREKMAD YFNCDNAEES IDFWGYNIYS WCGDSSYEES 240
  241 GYSTRTDEFR DYSVPVFFAE YGCNAVEPRK FTEVSALYGS RMASVWSGGI VYMYFQEANN 300
  301 YGLVSIDGDK VRTRADYSYL SQQLASATPS GTKKSEYTPA NSALQSCPPV NGDWLATASP 360
  361 LPPSPNGDLC SCMEESLSCV LKDTVSGDQI EKLFGTVCGY DVCEGVTTNA TTGKYGAYSV 420
  421 CSPKQQLSYA MNLYYEQQSA KGKGQSACNF NGAASTRTSS SPSGTCSALL KEAGISGTGT 480
  481 VTSSPTGVAG AAVVDSSGSA SASTSQGAAY MNAPGRVTAG IQQLGLYVVT AIAAGAGMVL 540
  541 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle