YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159131027
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVCRCCFTS TNNSLIVLSI WFLPYFRSCY PSSYSSVLPS FTERHGTTLA YQSIPPGTMA  60
   61 LNRRDIILFS TGGFIAWGLA VRWLPILRYL GYALVLGALL SCTAVLALVF LTIRPLDSAK 120
  121 PPRSSSLPLT FLLPKHWPRE VEGIRARSTY RTDSLYPQSF IVSESIDELL SLVTRDFIAS 180
  181 WYQHISPNPA FVNEVDRVIR AAIGNLCNRL LAEDLVSLVV SRIFPILTAH LKEFDVAERS 240
  241 VRGRNLTRNV TESEELDLAI AKKYRDGRLH PAAALSVSDQ KFVEQEYLRK ITLGLLPKLF 300
  301 PEQVLNSRIV TVLIREILAC AVLFPLVSVL SDPDTWNQLV EAYGRTTIQD RKTVQKIRAA 360
  361 LDEHASPAPK SKHGHPFPKL APNDSERAFE RFVRAIRRCN NLSDARRFRA LVASQLKRES 420
  421 MVEGQDPVYL RRLETGKRVL DQKVAKLSAP GGSNTPYANA VESHFRRNSS SSKPEASLID 480
  481 VMHDASGLSY FMEFMDRQKL MSLVQFWIVV DGFRNPLEDD FGDETSPSSS TWTTADRNDM 540
  541 ALISETYLAK PELKVSEEAR RAVKAFLSAG KRATPEQYRK ARTVILSTQS AVLEELQTVY 600
  601 YPKFKQSDLY YKYLASDEVS LAGSRASPVP VEPPARRPLP PLMARTASHP GQKPKDLRRA 660
  661 VASSSDARSM GKLFDDEEQA RRSIDSERST PLFDDDYDTD PLAASTHSLG NDSQSGFNDA 720
  721 TQNQAIKSME AALNDIIAND PENADLGEVR YIDSGLAGSF SVDRGLKSPR STGDLGRLDN 780
  781 RMDDNKAKPS IASLGLVDQS SRIGVFDDEL FPDQQKFLED EYDEPPETDD KDPADEVQEA 840
  841 APGDLGLTEA IEALTVDIEK LAAQETVIDA LTRKADLTNN TAELRILRKS KASIQREIHR 900
  901 KEMQRQQYII QESDNSLYGR STVRIQSIVV GKEADGREYA MYVIEVQRNA GEQMPAASWA 960
  961 VARRYSEFHE LHQRLRIRYP SVRHLEFPRR RMVMKLQKEF LQKRRLALEA YLRNLLLLPE1020
 1021 VCQTRDLRAF LSQRAIIPRD ETPRDGETKD LVTRIYNSVA DGMDDFLGNF GVLDQLSAAG1080
 1081 QNLISAATNH QHSPVSNSGL ATEDAVTAAE AEAELNAFED RELEPFIKPI CDLFLEAFEL1140
 1141 NKGNNWLRGR AVVVVLHQLL GGTIERKVRE GVRSLVQDES LLRYLSMVKE TMWPGGVLRQ1200
 1201 NKVRTASERL KSRTEASLVL ATLIPDVAGN VVGRANAQGA ARRIFATLNN QRLNSHLIFS1260
 1261 ILDEVVLVLF GGAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle