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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159131616
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDYNYDEQ GQFFPFFILT LTGLVTLPLT YNLLKPSKEL ENTAPRIQSD YKPEHGDLIE  60
   61 AQKRKRLRKE RRIKRIVTVI AGYAIMAWMA YLIVVTARTA PKIWDPYEIL GISRSADEKA 120
  121 ISRHYKRLSL IYHPDKIRPD PSKNETIETL NERFVELTKA YKALTDEEVR NNYIQYGHPD 180
  181 GKQSFSIGIA LPKLIVSEGN GKYVLLVYGA LLGVLLPYIV GKWWYGSQRY TKEKVLVASA 240
  241 GNIFREYKED ITDGGIINAL SAGVEFKDML KGPRAEAGLA KLEKKVLAEG SILVPETRKT 300
  301 LSQMDDSTRR KALALLWAYL GRIDLEDATL NGEKYEAAPI ALSLNEAFIA ISLAFGNLHP 360
  361 ILGSFRTSQH LIQAVAPGSS PLLQLPYFNN QVVKAIEGAD AKDHYTVQKF MSLPEDKRRS 420
  421 LTVGAGLLSE KQYSTAVSVA KQLPVLEVSR AFFKVMGEKV ITPSSLVQLV VKARFIPPGS 480
  481 TNIPEVNPAE LEDVDPDEDD LDALMGRKPP KNRPTRTVNG QQVENKIEII QPPLAHAPYL 540
  541 ARDHSPRWHI FLADAKQGKM AVPPFTFTTF DQPLFDEAGK PTFNVQTLKM QFQAPPQVGD 600
  601 FSFVMHMMCD SYLGLDTKLD ITLHVDDPAK AAALEEEDDI SEPDEDSIAG QMQALKTGQP 660
  661 PRKKARKPSD ESSEEESDTD GDAGDTSDTN TETDVED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle