YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159126939
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITSTLSLLA LSAIASAHSD HRQKTIAGPH QSLWYNTIPG DGGTQADSVF SGISTFGRLP  60
   61 YFPCLSSEAE KYDIAFVGAP FDTGTSYRPG ARFGPSGIRQ GSRRLNLYGG YNVPLEANPF 120
  121 VSELKVLDCG DIPVTSYDNA WAIQQIEEGH NSLLMRKPFT DADAEGLSRA GKTLPRIITL 180
  181 GGDHTITLPL LRSINKAYGP VTVIHFDSHL DTWKPKVFGG SPSQVAAINH GTYFYHAAME 240
  241 GLLKNDTNIH AGIRTTLSGP SDYENDGYCG FEIVEAREID TIGTEGIIKK IRDRVGTENP 300
  301 VYLSIDIDTL DPAFAPATGT PETGGWSTRE LRTIIRGLDG LNFIGADIVE VAPAYDTNAE 360
  361 LSTMAAADVL YEVLTIMVKK GPLSLSKGHE L

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	391	0.99