YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159127784
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPVALRMSS KALLPLSPLL RLSTASPALA RPCSPSPRTS ATLAPPTRQA PPPSSLSSSS  60
   61 FSPSFSPQQA NLSSPSSSRV RSSVSSASTR AALLSRHFSS YTPPQSPNMS YTVRKIGQAN 120
  121 TLEHRVYIEK DGVPISPFHD IPLYANPEQT ILNMVVEIPR WTNAKQEISK EEFLNPIKQD 180
  181 VKKGKLRFVR NCFPHKGYLW NYGAFPQTWE DPNVVHPETK AKGDNDPLDV CEIGELVGYP 240
  241 GQVKQVKVLG VMALLDEEET DWKVIVIDIN DPLAPKLNDI EDVERHLPGL LRATNEWFRI 300
  301 YKIPDGKPEN QFAFSGECKN KKYALDVIRE CADAWEKLIT GKSPRGDISL ANTSVENSSD 360
  361 RADPAQLASI PKGENLPPAP IDGSIDKWFF ISGAAV

Type	Start	End	Confidence
Signal Peptide	1	30	0.98
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	396	0.99