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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66852857, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGRPPGLH PAAGRDEDLM QMEESTPIYS TGQRPPVNDD NLLRQYNIDD SDQPQPRPSV  60
   61 SYDSFVGGRA PPAAGARAST SAHPPAQPGA YLSDPYSGAE MSRTYSQTSG LNNYQRYSVD 120
  121 DFDDDRDMHG YYNMDDDDHM ASPHRVRQAK DRNSILGLGG GLMGRAKHML GMGPEYSEMD 180
  181 LPLTEAGARA ARVDSVEGDT AAPRAQKKSR KSDFKFGFGR GKVDPSTLGP RMITLNNPPA 240
  241 NAVHKFVDNH VSTAKYNIVT FIPKFLFEQF SKYANLFFLF TAVLQQIPSV SPTNRYTTIV 300
  301 PLMIVLLVSA IKELVEDFKR RNSDKSLNHS KTQVLKGSAF HETKWVDVAV GDIVRVESEQ 360
  361 PFPADLVLLA SSEPEGLCYI ETANLDGETN LKIKQAIPET AHLVSPADLS RLSGRIRSEQ 420
  421 PNSSLYTYEA TLTMHAGGGE KELPLAPDQL LLRGATLRNT PWIHGIVVFT GHETKLMRNA 480
  481 TATPIKRTAV ERMVNVQILM LVSILVSLSV VSSVGDLIIR QTQAKKLVYL YYGSTSPVKQ 540
  541 FVLDIFTYWV LYSNLVPISL FVTIEIVKYA QAFLINSDLD IYYDKTDTPA TCRTSSLVEE 600
  601 LGQIEYIFSD KTGTLTCNQM EFKQCSIYGV QYGDEVSEDR RATADDGGEP GIYDFKKLKE 660
  661 NLHSHPSADA IHHFLTLLAT CHTVIPERNA ADPDKIKYQA ASPDEGALVE GAAALGYRFT 720
  721 NRRPRSVLFT TNGQEYEYEL LAVCEFNSTR KRMSTIFRCP DGKIRIYTKG ADTVILERLG 780
  781 PDNPIVEATL QHLEEYASEG LRTLCLAMRE IPEEEYQQWI QIYEKAATTV GGNRAEELDK 840
  841 AAELIEKDFY LLGATAIEDR LQDGVPDTIH TLQTAGIKIW VLTGDRQETA INIGMSCKLI 900
  901 SEDMTLLIVN EENAQATREN LTKKLQAVQS QGTSGEIEAL ALIIDGRSLT FALEKDMEEL 960
  961 FLDLAVLCKA VVCCRVSPLQ KALVVKLVKR HLKSLLLAIG DGANDVSMIQ AAHVGVGISG1020
 1021 VEGLQAARSA DVSIAQFRYL RKLLLVHGAW SYHRISRVIL YSFYKNIALY MTQFWYSFQN1080
 1081 AFSGEVIYES WTLSFYNVFF TVLPPFVMGI CDQFISARLL DRYPQLYQLG QKGMFFKRHS1140
 1141 FWSWIANGFY HSLLLYIVSQ LIFLWDLPQG DGKVAGHWVW GSALYTAVLA TVLGKAALIT1200
 1201 NIWTKYHFIA IPGSMVIWLA FLPAYGYAAP AIGFSTEYYG TIPRLFTSPI FYLMAVVLPC1260
 1261 ICLLRDYAWK YAKRMYYPQH YHHVQEIQKY NVQDYRPRME QFQKAIRKVR QVQRMRKQRG1320
 1321 YAFSQADEGG QMRVVNAYDT TRGRGRYGEM TSSRTLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle