YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67156801, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAVKSQRPV NLDLRTIKLP VTAYTSILHR ISGVILFLGI VVLLSWLDKS LSSEEGFEQV  60
   61 KGYLASPLVK LVAWGLVSAL LYHLVAGVRH LIMDTGIGET LEGGTKGSKI VIGVSVALIL 120
  121 LSGVWIW

Type	Start	End	Confidence
Cytoplasmic	1	25	0.80
Transmembrane Helix	26	47	0.89
Non-Cytoplasmic	48	67	0.81
Transmembrane Helix	68	92	0.79
Cytoplasmic	93	106	0.81
Transmembrane Helix	107	126	0.93
Non-Cytoplasmic	127	127	0.87