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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|59380672
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPISIMHISL MCAVLCLQLY GLGGTHGSHN GTEHNKTNAV TTSSDSRSSE PPVRTTLPVT  60
   61 PDSPTVTPTT PASAPEGSGE AHTSPPNTTE GPSLPESTPE PPAATSTGIP GASDVNSSTQ 120
  121 AARDTSTPTV RTGPPNSPSI PPTPQETHHP VRNLLSVTSH KPEETSAPSG SGKESPAANS 180
  181 PHPVASRPPT PSTTAQGPTE NNSYNTTGQL ESLTQLTALG PMTSLTQTDL PQSVTSIAVQ 240
  241 DSHPSPTNRS KRNLEMEIIL TLPQGLKKYY GKVLRLLQLT LEEDTEGLLE WCRRNLGLDC 300
  301 DDTFFRKRIE EFFITGEGHF NEVLQFRTPG TLSTTESTHA GLPTAEPFKS YFAKGFLSID 360
  361 SGYFSAKCYS RTSNSGLQLI NVTRHSTRIA DTPGPKITNL KTISCINLNA SVFKEHREVE 420
  421 INVLLPQVAV NLSNCHVTIK SHVCDYSLDI DGTVRLPHIH HDGTFIPGTY KIVIDKKNKL 480
  481 NDRCTLFTNC VIKGREVRKG QSVLRQYKTE IRIGKASTGS RRLLSDESGD DCISRTQLLR 540
  541 TETAEIHGDN YGGPGDKITI CNGSTIVDQR LGSELGCYTI NRVKSFKLCE NSATGKSCEV 600
  601 DSIPVKCRQG YCLKITQEGR GHVKLSRGSE VVLDACDSSC EVMIPKGTGD ILVDCSGGQQ 660
  661 HFLNDNLIDL GCPKIPLLGK MAIYICRMSN HPKTTMAFLF WFSFGYVITC IVCKAIFYFL 720
  721 IIVGTLGKRF KQYRELKPQT CTICETTPTN AIDAEMHDLN CSYNICPYCA SRLTSDGLAR 780
  781 HVTHCPKRKE KVXETELYLN LERIPWVVRK LLQVSESTGV ALKRSSWLIV LLVLFAVSLS 840
  841 PVQSAPIGHG KTIETYQVRE EYTSICLFVL GSILFIVSCL TKGLVNSVGN IFFPGLSICK 900
  901 TCSIGSINGF EIESHKCYCS LLCCPYCRHC SADREIHQLH LSICKKRKTG SNVMLAVCKR 960
  961 MCFRATMEVS NKALFIHSII NTTFVVCILI LAVCVVSTSA VEMESLPAGT WEREEDLTNF1020
 1021 CHQECQVTET ECLCPYEALV LRRPLFQDSI VKGMKNLLNS TSLETSLSIE APWGAINVQS1080
 1081 TYKPTVSAAN IALSWSSVEH RGNKILVSGR SESIMKLEER TGISWDLGVE DASESKLLTV1140
 1141 SVMDLSQMYS PVFEYLSGDR QVEEWPKATC TGDCPERCGC TSSTCLHKEW PHSRNWRCNP1200
 1201 TWCWGVGTGC TCCGLDVKDL FTDYMFVKWK VEYIKTEAIV CVELTSQERQ CSLIEAGTRF1260
 1261 NLGPVTITLS EPRNIQQKLP PEIITLHPRI EEGFFDLMHV QKVLSASTVC KLQSCTHGVP1320
 1321 GDLQVYHIGN LLKGDKVNGH LIHKIEPHFN TSWMSWDGCD LDYYCNMGDW PSCTYTGVTQ1380
 1381 HNHASFVNLL NIETDYTKSF HFHSKRVTAH GDTPQLDLKA RPSYGAGEIT VLVEVADMEL1440
 1441 HTKKIEISGL KFASLTCTGC YACSSGISCK VRIHVDEPDE FTVHVKSDDP DVVAASSSLM1500
 1501 ARKLEFGTDS TFKAFSAMPK TSLCFYIVER EYCKSCSEED TQKCVNTKLE QPQSILIEHK1560
 1561 GTIIGKQNNT CTAKASCWLE SVKSFFYGLK NMLSGIFGNV FVGIFLFLAP FILLILFFMF1620
 1621 GWRILFCFKC CRRTRGLFRY KHLENDEETG YRRIIERLNN KKGKNKLLDG ERLADRRIAE1680
 1681 LFSTKTHIG

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