YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163849264, gi...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRHSRQSQA DQCSKRIILP SNRQMKQREL IRISKFLSLV LRHRPEQIGL SLDQHGWAEV  60
   61 DELIRCANRH GLPLSRAQLE QVVAENDKQR FAFSADGRRI RANQGHSLPV DLQLTPAQPP 120
  121 PVLYHGTAER FVESIKRDGL LPGKRQYVHL SQDETTALTV GQRHGRPVVL TVHAAAMTAA 180
  181 GYVFYVSANG VWLTKQVPAR FIEFPA

Type	Start	End	Confidence
Cytoplasmic	1	168	0.54
Transmembrane Helix	169	188	0.65
Non-Cytoplasmic	189	206	0.78