YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56961974, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKHKWSIFI GALLFAAVLL WVQYDSTLKD SSSTWHLPMS GKVIVLDPGH GGMDGGAVSK  60
   61 TGTLEKEVTL AVALKLRDYL QEAGALVIMT REEDVDLADA GTAKIRQRKT EDLRKRAMII 120
  121 NDSEADAFLS IHMNAIPSER WNGAQTFYHL KNQRNEDMAV FIQEEIKRNL QNTNRYPKPI 180
  181 HHVYLLKEAE IPGALVEAGF LSNPQEAALL ATEEYQDKMA ASIYEGMLRF FTDEKAPNSN 240
  241 LHE

Type	Start	End	Confidence
Signal Peptide	1	24	0.86
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	243	0.99