YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56909637, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTIEWLIAV LALLGSIFGF LSAVGIVRLP DVYSRLHATG KNSTFGIMMI MAAVFLYFFV  60
   61 LKGEFIGKLL LTILFVFITV PIAALMISRS AYRIGIPMDA STVCDEMKPF YDKEKKTYAN 120
  121 NSKQTTKENP TKPLPTENRP

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.79
Transmembrane Helix	7	29	0.92
Cytoplasmic	30	41	0.70
Transmembrane Helix	42	61	0.93
Non-Cytoplasmic	62	68	0.65
Transmembrane Helix	69	88	0.95
Cytoplasmic	89	140	0.84