YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56911704, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVKKAIIP AAGLGTRFLP ATKAMPKEML PIVDKPTIQY IIEEAIEAGI EDIIIVTGKG  60
   61 KRAIEDHFDH SFELEQNLFN KGKLDMLEKV QASSKVELHY IRQKEPKGLG HAVWCARKFI 120
  121 GNEPFAVLLG DDIVQAETPG LKQLMNQYDQ TERSVIGVQP VPENETHRYG IIDPESQNGR 180
  181 LYRVSSFVEK PKQGTAPSNL AIMGRYILTP EIFTFLEKQE TGAGGEIQLT DAIQTLNEQQ 240
  241 SVYAYDFEGK RFDVGEKLGF VLTQLEFALE REELREPLLQ KMREFISEKT AIN

Type	Start	End	Confidence
Signal Peptide	1	24	0.78
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	293	0.99