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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57165717, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSLWSGVS GLQAHQVAMD VEGNNISNVN TTGFKYSRAD FGTMFSQTVK IATAPTDGRG  60
   61 GSNPLQIGLG VSVSSTTRIH SQGSVQTTDK NTDVAINGDG FFMVSDDGGL TRYLTRSGDF 120
  121 KLDAYGNFVN NAGFVVQGWN INWDDQTIDS SRSPQNIFID PGMHIPAAKS TEVAIKANLN 180
  181 SGLNIGTSSR NLYALDSVHG WNNKTQRPED ENDTGTTQFY TTSKNSVEVT EKGVDAGSLF 240
  241 NANGTGLNLR DGQGIWVSYA DAKFTTDKPA NVNVFDPNNH TNQNGSIFWG DKDNTVNLDI 300
  301 TLNGVNIQNA NIRSLDEAIA YINTFTAPTD TRDGTGVKAV KKADGSGIEF VNDNADGTTD 360
  361 NMKNINLTVN QANTAGERHT ITWNAGNNNF TAASAKNGAN SVWIPTAANV NGNAESIQII 420
  421 TAHKYVYSSN PVDIGPMYNP DGGPQFQPGV GNNAPTDPAS LNYWNAIQGS LKNSDARTFR 480
  481 TTEDLRELLQ RDARYGVDYD GDGSKTYDAD DINQAVKVVV TENGNFAISN ANETSTIPAN 540
  541 AGAGNTQVTT NPKNMSFNIT AYSNKQGTVS TNDAFAKIFK AFDGVLTVGG QIKESEQLKL 600
  601 SAFSAGLEIY DSLGSKHTLE VQFVKQSTTQ DGGNEWQMII RVPEPAEINT TGEGPTNIIV 660
  661 GTARFNNDGS LANYTPKTIN FSPNNGAAPN QQIKLSFGTS GSNDGLVSSN SASTLTGQAT 720
  721 DGYTSGNLKP DAIRVDDKGN ILGEFTNGKT FAVAKIAMAS VANNSGLEEI GGNLFKVTAN 780
  781 SGAIVVGEAG TGGRGEMKTS ALEMSNVDLS RSLTELIIIQ RGYQANSKTI STSDQMLQTL 840
  841 IQLKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle