YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237182, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFYTILSIL FISFMLSACA VLQKSSPLQE NKDFYILDTH TQKKISFEDM ILELLKADVI  60
   61 LLGEKHDEVK HKISQVMIFN ALEGNLSSQN INFDVALEML VSTEQNHLDK AFKNKKTIKA 120
  121 NELTNALNWD KVWKWKDYEQ FVNVVFYSKS KILGVNLSRS EITSIYNGAQ PLKGYVSTTN 180
  181 EVKKQLFDII SLSHKLNPEE NKKLLDKLVE IQQFKDRRMA DVLVHHPNKV LLLAGSYHTS 240
  241 KKIGIPLHIQ DFKSSKKIVV VNLSYGEIDL KDSDYVLIYK GEE

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	283	0.99