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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57165987, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLSLFCAV GLCFASFAFS EELEFDSLEI SGSKIKNDEK PFVTPGATST REDIGSDTQS  60
   61 IDSIVRSIPG TYTNTDQAQG TVQVNIRGMS GFGRVNTMID GVTQTFYGSA SDDPARFHSQ 120
  121 TGTSAFGAVI DTNFLIGVDV TRGTFEGVGE ANALMGSANF KTIGINDIVH DGNIFGFLGR 180
  181 FSYGSNGIGP SYMSAVAGKT ELENNGYVGA LFGYSAKRIT QNYTVGGGGK IGSSMVDTDG 240
  241 DGIADTNIAP FDPDFLTQKP NSQLFKLEYV PNSFTNTIFS YRRYQNELAG RKIHNDNYQL 300
  301 DFWHNPNEWL NVNTLIAYNQ GIQTYGSKST FAANDAIANT KAKNTATTFD ISDTLEGEWH 360
  361 GFNLNTRFGA NILLNDYKNT LNTSIQGVNS IPFQPRGKQN LFTYYLDNSL NYGIFTLDTN 420
  421 VNLLDWNIKG HRPACDEVNF MCFPKAATDI DKNGLRLNAS VMLSAAIHEL FTPFVSFART 480
  481 NRAPNVQEMF FSNNEGNGIN PFLKPEQANT WQIGFNSFKH GLLKDDDRFG FKAVYYHTKI 540
  541 KDYIYNEQFY LEDPSKDPPS SQFYMHLNSA DDTIFKGVEL ELSYDLGFAY AKAMYSRQDT 600
  601 SSTISQTSGP LLGSFSASKI MELPKDYANV ELGFRLNDKI SFGGIAKYTG KAKRVNPNTD 660
  661 DWNKDPNNPY YPKPTTQDLP KIPIIVDLYW NIEWFKNLTM RAEVQNLFDK NYMDALNAYN 720
  721 SLDNQLQYNG AGDPIYLFSN SARGRTFVVS FEYKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle