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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57167056, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFGSLSSLG FGSGVLTQDT IDKLKEAEQK ARIDPYTKKI EENTTKQKDL TEIKTKLLSF  60
   61 QTAVSSLADA TVFAKRKVVG SISDNPPASL TVNSGVALQS MNINVTQLAQ KDVYQSKGLA 120
  121 NDSGFINANL TGTTDLTFFS NGKEYTVTVD KNTTYRDLAD KINEASGGEI VAKIVNTGEK 180
  181 GTPYRLTLTS KETGEDSAIS FYAGKKDAQG QYKSDSEAEE IFKSLGWELD TASSIDPAKD 240
  241 KKGYGIKDPS LHIQTAQNAE FTLDGIKMFR SSNTVTDLGV GMTLTLNKTG EINFDVQQDF 300
  301 EGVTKAMQDL VDAYNDLVTN LNAATDYNSE TGTKGTLQGI SEVNSIRSSI LADLFDSQVV 360
  361 DGTTEDANGN KVNTKVMLSM QDFGLSLNDA GTLSFDSSKF EQKVKEDPDS TESFFSNITK 420
  421 YEDINHTGEV IKTGSLSKYL TNGLEFKPGD FTIVFNNQTY DLSKNSDGTN FKLTGKTEEE 480
  481 LLQNLANHIN SKGIEGLKVK VESYNQNNVT GFRLNFSGDG SSDFSIKGNA SILKELGLSD 540
  541 VNITSKPIEG KGIFSKLKAT LQEMTGKDGS ITKYDESLTN DIKSLNTSKD STQAMIDTRY 600
  601 DTMANQWLQY ESILNKLNQQ LNTVTNMINA ANNSNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle